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PathoSEEK® ID Report

Customer

Sample Accession: RSP13213
Registrant: kevin Mckernan
Company: 12306 Kevin Mckernan
Date: 9/12/2024 3:04 pm
Sample Name: JL x MC7-Flower
Strain: JL x MC7
Project Type 420403 Whole Genome Shotgun Sequencing

Summary

84.01% of the reads are classified (15.99% unclassified).

The top 3 species detected are:

  1. Cannabis sativa (97.39% of classified reads) Eukaryota (Not Fungi)
  2. uncultured Methanosphaera sp (0.96% of classified reads) Archaea
  3. uncultured Methanobrevibacter sp (0.65% of classified reads) Archaea

All

Fungal

0.05% classifed reads

Bacterial

0.16% classifed reads

Table

Table with complete taxonomy details detailing how all reads are classified

Details

Sequencing Throughput and Quality Report

Total Read Pairs 70,913,516 (35,456,758 Reads)
Yield (Mbases) 10,637 Mbases
Mean Quality Score (Phred) 37.98
% Bases >= Q30 90.42%